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dbVar

Database of genomic structural variation

nsv5954976

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 150 SVs from 25 studies. See in: genome view

Submitted genomic189,677,331-189,677,331

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5954976	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	189,677,331	189,677,331
nsv5954976	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	189,395,120	189,395,120

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17423139	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17423139	Submitted genomic		NC_000003.12:g.189 677331_189677332in s52	GRCh38 (hg38)		NC_000003.12	Chr3	189,677,331	189,677,331
nssv17423139	Remapped	Perfect	NC_000003.11:g.189 395120_189395121in s52	GRCh37.p13	First Pass	NC_000003.11	Chr3	189,395,120	189,395,120

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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