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dbVar

Database of genomic structural variation

nsv5959359

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 170 SVs from 35 studies. See in: genome view

Submitted genomic60,955,635-60,955,635

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5959359	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	60,955,635	60,955,635
nsv5959359	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000003.11	Chr3	60,941,307	60,941,307
nsv5959359	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_003871058.1	Chr3\|NW_00 3871058.1	383,037	383,037

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17424537	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17424537	Submitted genomic		NC_000003.12:g.609 55635_60955636ins6 2	GRCh38 (hg38)		NC_000003.12	Chr3	60,955,635	60,955,635
nssv17424537	Remapped	Perfect	NW_003871058.1:g.3 83037_383038ins62	GRCh37.p13	First Pass	NW_003871058.1	Chr3\|NW_00 3871058.1	383,037	383,037
nssv17424537	Remapped	Perfect	NC_000003.11:g.609 41307_60941308ins6 2	GRCh37.p13	Second Pass	NC_000003.11	Chr3	60,941,307	60,941,307

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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