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dbVar

Database of genomic structural variation

nsv5998841

Organism: Homo sapiens

Study:nstd212 (Wu et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:140,735

Publication(s):Wu et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 682 SVs from 60 studies. See in: genome view

Submitted genomic12,866,759-13,007,493

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5998841	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	12,866,759	13,007,493
nsv5998841	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	12,866,871	13,007,605

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17539535	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17539535	Submitted genomic		NC_000005.10:g.128 66759_13007493del	GRCh38 (hg38)		NC_000005.10	Chr5	12,866,759	13,007,493
nssv17539535	Remapped	Perfect	NC_000005.9:g.1286 6871_13007605del	GRCh37.p13	First Pass	NC_000005.9	Chr5	12,866,871	13,007,605

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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