nsv605638
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,994
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 592 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 593 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 286 SVs from 20 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv605638 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 207,189 | 216,182 |
| nsv605638 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 207,189 | 216,182 |
| nsv605638 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 302,272 | 311,265 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1077703 | copy number loss | SNP array | SNP genotyping analysis |
| nssv1077704 | copy number loss | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1077703 | Remapped | Perfect | NC_000007.14:g.(?_ 207189)_(216182_?) del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 207,189 | 216,182 |
| nssv1077704 | Remapped | Perfect | NC_000007.14:g.(?_ 207189)_(216182_?) del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 207,189 | 216,182 |
| nssv1077703 | Remapped | Perfect | NC_000007.13:g.(?_ 207189)_(216182_?) del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 207,189 | 216,182 |
| nssv1077704 | Remapped | Perfect | NC_000007.13:g.(?_ 207189)_(216182_?) del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 207,189 | 216,182 |
| nssv1077703 | Submitted genomic | NC_000007.12:g.(?_ 302272)_(311265_?) del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 302,272 | 311,265 | ||
| nssv1077704 | Submitted genomic | NC_000007.12:g.(?_ 302272)_(311265_?) del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 302,272 | 311,265 |