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dbVar

Database of genomic structural variation

nsv611058

Organism: Homo sapiens

Study:nstd54 (Cooper et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:69,231

Publication(s):Cooper et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1603 SVs from 89 studies. See in: genome view

Remapped(Score: Perfect):39,451,651-39,520,881

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv611058	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nsv611058	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nsv611058	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000008.9	Chr8	39,428,327	39,497,557

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv1111215	copy number loss	SNP array	SNP genotyping analysis
nssv1111216	copy number loss	SNP array	SNP genotyping analysis
nssv1111217	copy number gain	SNP array	SNP genotyping analysis
nssv1111218	copy number loss	SNP array	SNP genotyping analysis
nssv1111219	copy number loss	SNP array	SNP genotyping analysis

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1111215	Remapped	Perfect	NC_000008.11:g.(?_ 39451651)_(3952088 1_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nssv1111216	Remapped	Perfect	NC_000008.11:g.(?_ 39451651)_(3952088 1_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nssv1111217	Remapped	Perfect	NC_000008.11:g.(?_ 39451651)_(3952088 1_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nssv1111218	Remapped	Perfect	NC_000008.11:g.(?_ 39451651)_(3952088 1_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nssv1111219	Remapped	Perfect	NC_000008.11:g.(?_ 39451651)_(3952088 1_?)del	GRCh38.p12	First Pass	NC_000008.11	Chr8	39,451,651	39,520,881
nssv1111215	Remapped	Perfect	NC_000008.10:g.(?_ 39309170)_(3937840 0_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nssv1111216	Remapped	Perfect	NC_000008.10:g.(?_ 39309170)_(3937840 0_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nssv1111217	Remapped	Perfect	NC_000008.10:g.(?_ 39309170)_(3937840 0_?)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nssv1111218	Remapped	Perfect	NC_000008.10:g.(?_ 39309170)_(3937840 0_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nssv1111219	Remapped	Perfect	NC_000008.10:g.(?_ 39309170)_(3937840 0_?)del	GRCh37.p13	First Pass	NC_000008.10	Chr8	39,309,170	39,378,400
nssv1111215	Submitted genomic		NC_000008.9:g.(?_3 9428327)_(39497557 _?)del	NCBI36 (hg18)		NC_000008.9	Chr8	39,428,327	39,497,557
nssv1111216	Submitted genomic		NC_000008.9:g.(?_3 9428327)_(39497557 _?)del	NCBI36 (hg18)		NC_000008.9	Chr8	39,428,327	39,497,557
nssv1111217	Submitted genomic		NC_000008.9:g.(?_3 9428327)_(39497557 _?)dup	NCBI36 (hg18)		NC_000008.9	Chr8	39,428,327	39,497,557
nssv1111218	Submitted genomic		NC_000008.9:g.(?_3 9428327)_(39497557 _?)del	NCBI36 (hg18)		NC_000008.9	Chr8	39,428,327	39,497,557
nssv1111219	Submitted genomic		NC_000008.9:g.(?_3 9428327)_(39497557 _?)del	NCBI36 (hg18)		NC_000008.9	Chr8	39,428,327	39,497,557

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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