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dbVar

Database of genomic structural variation

nsv6113667

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5409436 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 86 SVs from 23 studies. See in: genome view

Remapped(Score: Perfect):169,826,969-169,827,020

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6113667	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	169,826,969	169,827,020
nsv6113667	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	169,253,973	169,254,024

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17674153	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17674153	Remapped	Perfect	NC_000005.10:g.169 826969_169827020in s?	GRCh38.p12	First Pass	NC_000005.10	Chr5	169,826,969	169,827,020
nssv17674153	Submitted genomic		NC_000005.9:g.1692 53973_169254024ins ?	GRCh37 (hg19)		NC_000005.9	Chr5	169,253,973	169,254,024

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17674153	0.015	97	6404

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