Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6113810

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:56

Description:nsv5430655 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 102 SVs from 26 studies. See in: genome view

Remapped(Score: Perfect):40,561,991-40,562,046

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6113810	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	40,561,991	40,562,046
nsv6113810	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	40,854,190	40,854,245

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17964118	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17964118	Remapped	Perfect	NC_000015.10:g.405 61991_40562046ins?	GRCh38.p12	First Pass	NC_000015.10	Chr15	40,561,991	40,562,046
nssv17964118	Submitted genomic		NC_000015.9:g.4085 4190_40854245ins?	GRCh37 (hg19)		NC_000015.9	Chr15	40,854,190	40,854,245

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17964118	0.243	1558	6404

You are here: NCBI