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dbVar

Database of genomic structural variation

nsv6115270

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:nsv5419563 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 173 SVs from 20 studies. See in: genome view

Remapped(Score: Perfect):102,783,563-102,783,563

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6115270	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	102,783,563	102,783,563
nsv6115270	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	103,435,913	103,435,913

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17963204	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17963204	Remapped	Perfect	NC_000013.11:g.102 783563_102783564in s?	GRCh38.p12	First Pass	NC_000013.11	Chr13	102,783,563	102,783,563
nssv17963204	Submitted genomic		NC_000013.10:g.103 435913_103435914in s?	GRCh37 (hg19)		NC_000013.10	Chr13	103,435,913	103,435,913

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17963204	0.039	246	6322

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