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dbVar

Database of genomic structural variation

nsv6116370

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5420950 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 25 studies. See in: genome view

Remapped(Score: Perfect):38,477,244-38,477,295

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6116370	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	38,477,244	38,477,295
nsv6116370	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	38,769,445	38,769,496

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17964100	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17964100	Remapped	Perfect	NC_000015.10:g.384 77244_38477295ins?	GRCh38.p12	First Pass	NC_000015.10	Chr15	38,477,244	38,477,295
nssv17964100	Submitted genomic		NC_000015.9:g.3876 9445_38769496ins?	GRCh37 (hg19)		NC_000015.9	Chr15	38,769,445	38,769,496

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17964100	0.134	860	6404

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