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dbVar

Database of genomic structural variation

nsv6126996

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:144

Description:nsv5531665 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 84 SVs from 18 studies. See in: genome view

Remapped(Score: Perfect):10,233,258-10,233,401

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6126996	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	10,233,258	10,233,401
nsv6126996	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	10,213,906	10,214,049

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17959565	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17959565	Remapped	Perfect	NC_000020.11:g.102 33258_10233401del	GRCh38.p12	First Pass	NC_000020.11	Chr20	10,233,258	10,233,401
nssv17959565	Submitted genomic		NC_000020.10:g.102 13906_10214049del	GRCh37 (hg19)		NC_000020.10	Chr20	10,213,906	10,214,049

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17959565	0.016	104	6404

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