nsv6133006
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:84,559
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 501 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 499 SVs from 52 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv6133006 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 39,291,897 | 39,291,906 | 39,376,444 | 39,376,455 |
nsv6133006 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 37,448,150 | 37,448,159 | 37,532,697 | 37,532,708 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv17678355 | inversion | SAMN20524665 | Sequencing | Paired-end mapping | 405 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv17678355 | Remapped | Perfect | NC_000017.11:g.(39 291897_39291906)_( 39376444_39376455) inv | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 39,291,897 | 39,291,906 | 39,376,444 | 39,376,455 |
nssv17678355 | Submitted genomic | NC_000017.10:g.(37 448150_37448159)_( 37532697_37532708) inv | GRCh37 (hg19) | NC_000017.10 | Chr17 | 37,448,150 | 37,448,159 | 37,532,697 | 37,532,708 |