nsv6133288
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:84,567
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 502 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 500 SVs from 53 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv6133288 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 39,291,886 | 39,291,899 | 39,376,439 | 39,376,452 |
| nsv6133288 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 37,448,139 | 37,448,152 | 37,532,692 | 37,532,705 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17678330 | inversion | SAMN20524664 | Sequencing | Paired-end mapping | 739 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv17678330 | Remapped | Perfect | NC_000017.11:g.(39 291886_39291899)_( 39376439_39376452) inv | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 39,291,886 | 39,291,899 | 39,376,439 | 39,376,452 |
| nssv17678330 | Submitted genomic | NC_000017.10:g.(37 448139_37448152)_( 37532692_37532705) inv | GRCh37 (hg19) | NC_000017.10 | Chr17 | 37,448,139 | 37,448,152 | 37,532,692 | 37,532,705 |