nsv6134726
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:137,440
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 535 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 535 SVs from 62 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv6134726 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 91,367,639 | 91,367,642 | 91,505,075 | 91,505,078 |
nsv6134726 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 92,288,790 | 92,288,793 | 92,426,226 | 92,426,229 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv17679380 | deletion | SAMN20524660 | Sequencing | Paired-end mapping | 208 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv17679380 | Remapped | Perfect | NC_000004.12:g.(91 367639_91367642)_( 91505075_91505078) del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 91,367,639 | 91,367,642 | 91,505,075 | 91,505,078 |
nssv17679380 | Submitted genomic | NC_000004.11:g.(92 288790_92288793)_( 92426226_92426229) del | GRCh37 (hg19) | NC_000004.11 | Chr4 | 92,288,790 | 92,288,793 | 92,426,226 | 92,426,229 |