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dbVar

Database of genomic structural variation

nsv6134762

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:90,257

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 441 SVs from 55 studies. See in: genome view

Remapped(Score: Perfect):116,778,370-116,868,626

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134762	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	116,778,370	116,778,382	116,868,611	116,868,626
nsv6134762	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	116,497,217	116,497,229	116,587,458	116,587,473

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681958	deletion	SAMN20524657	Sequencing	Paired-end mapping	656

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17681958	Remapped	Perfect	NC_000003.12:g.(11 6778370_116778382) _(116868611_116868 626)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	116,778,370	116,778,382	116,868,611	116,868,626
nssv17681958	Submitted genomic		NC_000003.11:g.(11 6497217_116497229) _(116587458_116587 473)del	GRCh37 (hg19)		NC_000003.11	Chr3	116,497,217	116,497,229	116,587,458	116,587,473

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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