Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6134879

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:199,707

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 971 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):90,850,031-91,049,737

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134879	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	90,850,031	90,850,034	91,049,734	91,049,737
nsv6134879	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	91,771,182	91,771,185	91,970,885	91,970,888

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681220	deletion	SAMN20524656	Sequencing	Paired-end mapping	419

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17681220	Remapped	Perfect	NC_000004.12:g.(90 850031_90850034)_( 91049734_91049737) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	90,850,031	90,850,034	91,049,734	91,049,737
nssv17681220	Submitted genomic		NC_000004.11:g.(91 771182_91771185)_( 91970885_91970888) del	GRCh37 (hg19)		NC_000004.11	Chr4	91,771,182	91,771,185	91,970,885	91,970,888

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI