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dbVar

Database of genomic structural variation

nsv6134960

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:67,450

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 451 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):55,658,032-55,725,481

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134960	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	55,658,032	55,658,033	55,725,478	55,725,481
nsv6134960	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	54,953,860	54,953,861	55,021,306	55,021,309

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17678167	duplication	SAMN20524660	Sequencing	Paired-end mapping	208

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17678167	Remapped	Perfect	NC_000005.10:g.(55 658032_55658033)_( 55725478_55725481) dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	55,658,032	55,658,033	55,725,478	55,725,481
nssv17678167	Submitted genomic		NC_000005.9:g.(549 53860_54953861)_(5 5021306_55021309)d up	GRCh37 (hg19)		NC_000005.9	Chr5	54,953,860	54,953,861	55,021,306	55,021,309

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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