Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6135632

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:79,603

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 330 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):160,266,220-160,345,822

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6135632	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	160,266,220	160,266,223	160,345,819	160,345,822
nsv6135632	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	159,693,227	159,693,230	159,772,826	159,772,829

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681513	deletion	SAMN20524657	Sequencing	Paired-end mapping	656

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17681513	Remapped	Perfect	NC_000005.10:g.(16 0266220_160266223) _(160345819_160345 822)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	160,266,220	160,266,223	160,345,819	160,345,822
nssv17681513	Submitted genomic		NC_000005.9:g.(159 693227_159693230)_ (159772826_1597728 29)del	GRCh37 (hg19)		NC_000005.9	Chr5	159,693,227	159,693,230	159,772,826	159,772,829

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI