nsv62
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:52,319
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 603 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 603 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 19 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv62 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 1,908,931 | 1,961,249 |
| nsv62 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 1,930,161 | 1,982,479 |
| nsv62 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000011.8 | Chr11 | 1,886,737 | 1,939,055 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv62 | inversion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv62 | Remapped | Perfect | NC_000011.10:g.(19 08931_?)_(?_196124 9)inv | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 1,908,931 | 1,961,249 |
| nssv62 | Remapped | Perfect | NC_000011.9:g.(193 0161_?)_(?_1982479 )inv | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 1,930,161 | 1,982,479 |
| nssv62 | Submitted genomic | NC_000011.8:g.(188 6737_?)_(?_1939055 )inv | NCBI35 (hg17) | NC_000011.8 | Chr11 | 1,886,737 | 1,939,055 |