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dbVar

Database of genomic structural variation

nsv6295002

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5413352 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 108 SVs from 22 studies. See in: genome view

Remapped(Score: Perfect):105,617,346-105,617,397

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6295002	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	105,617,346	105,617,397
nsv6295002	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	108,379,627	108,379,678

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17654572	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17654572	Remapped	Perfect	NC_000009.12:g.105 617346_105617397in s?	GRCh38.p12	First Pass	NC_000009.12	Chr9	105,617,346	105,617,397
nssv17654572	Submitted genomic		NC_000009.11:g.108 379627_108379678in s?	GRCh37 (hg19)		NC_000009.11	Chr9	108,379,627	108,379,678

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17654572	0.58	3714	6404

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