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dbVar

Database of genomic structural variation

nsv6308785

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5555289 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 83 SVs from 23 studies. See in: genome view

Remapped(Score: Perfect):12,170,227-12,170,278

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308785	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	12,170,227	12,170,278
nsv6308785	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	12,211,727	12,211,778

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17663281	sva insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17663281	Remapped	Perfect	NC_000003.12:g.121 70227_12170278ins?	GRCh38.p12	First Pass	NC_000003.12	Chr3	12,170,227	12,170,278
nssv17663281	Submitted genomic		NC_000003.11:g.122 11727_12211778ins?	GRCh37 (hg19)		NC_000003.11	Chr3	12,211,727	12,211,778

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17663281	0.232	1483	6404

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