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dbVar

Database of genomic structural variation

nsv6308815

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5560407 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 171 SVs from 29 studies. See in: genome view

Remapped(Score: Perfect):35,049,936-35,049,987

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308815	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	35,049,936	35,049,987
nsv6308815	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	35,338,864	35,338,915

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17657002	sva insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17657002	Remapped	Perfect	NC_000010.11:g.350 49936_35049987ins?	GRCh38.p12	First Pass	NC_000010.11	Chr10	35,049,936	35,049,987
nssv17657002	Submitted genomic		NC_000010.10:g.353 38864_35338915ins?	GRCh37 (hg19)		NC_000010.10	Chr10	35,338,864	35,338,915

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17657002	0.134	772	5764

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