nsv6314228
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex chromosomal rearrangement
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1
- Description:46;XX;t(6;7;17)(p23;p22;q25)pat AND Isolated Pierre-Robin syndrome
- Publication(s):Redin et al. 2016
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 91 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 91 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 91 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 91 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 80 SVs from 13 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 16,030,475 | 16,030,475 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 16,030,478 | 16,030,478 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 10,765,436 | 10,765,436 | - |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 10,765,438 | 10,765,438 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 70,769,700 | 70,769,700 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 70,769,701 | 70,769,701 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 71,044,361 | 71,044,361 | + |
nsv6314228 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 71,044,362 | 71,044,362 | - |
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 16,030,706 | 16,030,706 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 16,030,709 | 16,030,709 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 10,805,063 | 10,805,063 | - | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 10,805,065 | 10,805,065 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 68,765,841 | 68,765,841 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 68,765,842 | 68,765,842 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 69,040,502 | 69,040,502 | + | ||
nsv6314228 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 69,040,503 | 69,040,503 | - |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv17975649 | interchromosomal translocation | Multiple | Multiple | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975648 | interchromosomal translocation | Multiple | Multiple | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975650 | interchromosomal translocation | Multiple | Multiple | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975647 | intrachromosomal translocation | Multiple | Multiple | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv17975649 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 16,030,475 | 16,030,475 | + |
nssv17975648 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 16,030,478 | 16,030,478 | + |
nssv17975650 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 10,765,436 | 10,765,436 | - |
nssv17975649 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 10,765,438 | 10,765,438 | + |
nssv17975650 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 70,769,700 | 70,769,700 | + |
nssv17975647 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 70,769,701 | 70,769,701 | + |
nssv17975648 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 71,044,361 | 71,044,361 | + |
nssv17975647 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 71,044,362 | 71,044,362 | - |
nssv17975649 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 16,030,706 | 16,030,706 | + | ||
nssv17975648 | Submitted genomic | GRCh37 (hg19) | NC_000006.11 | Chr6 | 16,030,709 | 16,030,709 | + | ||
nssv17975650 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 10,805,063 | 10,805,063 | - | ||
nssv17975649 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 10,805,065 | 10,805,065 | + | ||
nssv17975650 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 68,765,841 | 68,765,841 | + | ||
nssv17975647 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 68,765,842 | 68,765,842 | + | ||
nssv17975648 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 69,040,502 | 69,040,502 | + | ||
nssv17975647 | Submitted genomic | GRCh37 (hg19) | NC_000017.10 | Chr17 | 69,040,503 | 69,040,503 | - |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|
nssv17975649 | interchromosomal translocation | paternal | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975648 | interchromosomal translocation | paternal | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975650 | interchromosomal translocation | paternal | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |
nssv17975647 | intrachromosomal translocation | paternal | Isolated Pierre Robin syndrome; PIERRE ROBIN SYNDROME; PRBNS; Pierre-Robin sequence; Robin sequence | Uncertain significance | ClinVar | RCV000258659.1, VCV000267909.1 |