nsv6314357
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex chromosomal rearrangement
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:12
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1
- Description:46;XY;t(1;10;4)(p32.2;q21.1;q23)dn AND multiple conditions
- Publication(s):Manickam et al. 2021, Michelson et al. 2011, Moeschler et al. 2014, Redin et al. 2016, Shao et al. 2021
- ClinVar: RCV000258600.2
- ClinVar: VCV000268034.1
- HP: 0000316
- HP: 0000750
- HP: 0001249
- HP: 0002751
- HP: 0011344
- MONDO: 0001071
- MeSH: D008607
- MedGen: C0020534
- MedGen: C0454644
- MedGen: C0575158
- MedGen: C1837397
- MedGen: C3714756
- OMIM: 145400
- PubMed: 21956720
- PubMed: 25157020
- PubMed: 27841880
- PubMed: 34131312
- PubMed: 34211152
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 110 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 129 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 139 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 86 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 86 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 101 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 129 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 139 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 86 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 86 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 122 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 120 SVs from 32 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 50,295,791 | 50,295,791 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 50,295,798 | 50,295,798 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 101,366,634 | 101,366,634 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 101,366,641 | 101,366,641 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 103,816,979 | 103,816,979 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 103,817,839 | 103,817,839 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,104,543 | 104,104,543 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,107,238 | 104,107,238 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,107,243 | 104,107,243 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,108,613 | 104,108,613 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,113,993 | 104,113,993 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,115,551 | 104,115,551 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,115,578 | 104,115,578 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,824,626 | 104,824,626 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 104,824,671 | 104,824,671 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 54,033,420 | 54,033,420 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 54,033,422 | 54,033,422 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,760,153 | 55,760,153 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,760,153 | 55,760,153 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,760,157 | 55,760,157 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,761,328 | 55,761,328 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,761,340 | 55,761,340 | - |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,764,027 | 55,764,027 | + |
nsv6314357 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 55,764,045 | 55,764,045 | + |
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 50,761,463 | 50,761,463 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 50,761,470 | 50,761,470 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 102,287,791 | 102,287,791 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 102,287,798 | 102,287,798 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 104,738,136 | 104,738,136 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 104,738,996 | 104,738,996 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,025,700 | 105,025,700 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,028,395 | 105,028,395 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,028,400 | 105,028,400 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,029,770 | 105,029,770 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,035,150 | 105,035,150 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,036,708 | 105,036,708 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,036,735 | 105,036,735 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,745,783 | 105,745,783 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 105,745,828 | 105,745,828 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 55,793,180 | 55,793,180 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 55,793,182 | 55,793,182 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,519,913 | 57,519,913 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,519,913 | 57,519,913 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,519,917 | 57,519,917 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,521,088 | 57,521,088 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,521,100 | 57,521,100 | - | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,523,787 | 57,523,787 | + | ||
nsv6314357 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 57,523,805 | 57,523,805 | + |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv17975447 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 50,295,791 | 50,295,791 | - |
nssv17975449 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 50,295,798 | 50,295,798 | + |
nssv17975450 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 101,366,634 | 101,366,634 | + |
nssv17975447 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 101,366,641 | 101,366,641 | - |
nssv17975446 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 103,816,979 | 103,816,979 | - |
nssv17975451 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 103,817,839 | 103,817,839 | + |
nssv17975452 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,104,543 | 104,104,543 | + |
nssv17975448 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,107,238 | 104,107,238 | - |
nssv17975453 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,107,243 | 104,107,243 | + |
nssv17975444 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,108,613 | 104,108,613 | - |
nssv17975455 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,113,993 | 104,113,993 | + |
nssv17975445 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,115,551 | 104,115,551 | + |
nssv17975454 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,115,578 | 104,115,578 | + |
nssv17975455 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,824,626 | 104,824,626 | + |
nssv17975444 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 104,824,671 | 104,824,671 | - |
nssv17975451 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 54,033,420 | 54,033,420 | + |
nssv17975445 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 54,033,422 | 54,033,422 | + |
nssv17975452 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,760,153 | 55,760,153 | - |
nssv17975454 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,760,153 | 55,760,153 | - |
nssv17975446 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,760,157 | 55,760,157 | + |
nssv17975448 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,761,328 | 55,761,328 | + |
nssv17975453 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,761,340 | 55,761,340 | - |
nssv17975449 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,764,027 | 55,764,027 | + |
nssv17975450 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 55,764,045 | 55,764,045 | + |
nssv17975447 | Submitted genomic | GRCh37 (hg19) | NC_000001.10 | Chr1 | 50,761,463 | 50,761,463 | - | ||
nssv17975449 | Submitted genomic | GRCh37 (hg19) | NC_000001.10 | Chr1 | 50,761,470 | 50,761,470 | + | ||
nssv17975450 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 102,287,791 | 102,287,791 | + | ||
nssv17975447 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 102,287,798 | 102,287,798 | - | ||
nssv17975446 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 104,738,136 | 104,738,136 | - | ||
nssv17975451 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 104,738,996 | 104,738,996 | + | ||
nssv17975452 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,025,700 | 105,025,700 | + | ||
nssv17975448 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,028,395 | 105,028,395 | - | ||
nssv17975453 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,028,400 | 105,028,400 | + | ||
nssv17975444 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,029,770 | 105,029,770 | - | ||
nssv17975455 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,035,150 | 105,035,150 | + | ||
nssv17975445 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,036,708 | 105,036,708 | + | ||
nssv17975454 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,036,735 | 105,036,735 | + | ||
nssv17975455 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,745,783 | 105,745,783 | + | ||
nssv17975444 | Submitted genomic | GRCh37 (hg19) | NC_000004.11 | Chr4 | 105,745,828 | 105,745,828 | - | ||
nssv17975451 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 55,793,180 | 55,793,180 | + | ||
nssv17975445 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 55,793,182 | 55,793,182 | + | ||
nssv17975452 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,519,913 | 57,519,913 | - | ||
nssv17975454 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,519,913 | 57,519,913 | - | ||
nssv17975446 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,519,917 | 57,519,917 | + | ||
nssv17975448 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,521,088 | 57,521,088 | + | ||
nssv17975453 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,521,100 | 57,521,100 | - | ||
nssv17975449 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,523,787 | 57,523,787 | + | ||
nssv17975450 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 57,523,805 | 57,523,805 | + |