nsv6314422
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex chromosomal rearrangement
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1
- Description:
46;XX;inv(7)(p13q11.23) AND multiple conditions - Publication(s):Redin et al. 2016
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 55 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 56 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 115 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 126 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 55 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 56 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 115 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 126 SVs from 27 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv6314422 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 47,033,206 | 47,033,206 | - |
nsv6314422 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 47,092,259 | 47,092,259 | + |
nsv6314422 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 69,940,754 | 69,940,754 | + |
nsv6314422 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 69,978,935 | 69,978,935 | - |
nsv6314422 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 47,072,804 | 47,072,804 | - | ||
nsv6314422 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 47,131,857 | 47,131,857 | + | ||
nsv6314422 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 69,405,740 | 69,405,740 | + | ||
nsv6314422 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 69,443,921 | 69,443,921 | - |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv17975975 | inversion | Multiple | Multiple | Abnormal facial shape; Abnormal facial shape; Atypical behavior; Behavioral abnormality | Pathogenic | ClinVar | RCV000258763.1, VCV000267970.1 |
nssv17975936 | inversion | Multiple | Multiple | Abnormal facial shape; Abnormal facial shape; Atypical behavior; Behavioral abnormality | Pathogenic | ClinVar | RCV000258763.1, VCV000267970.1 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17975975 | Remapped | Perfect | NC_000007.14:g.699 40754inv673NC_0000 07.14:g.47033206in v673 | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 47,033,206 | 47,033,206 |
nssv17975936 | Remapped | Perfect | NC_000007.14:g.470 92259invNC_000007. 14:g.69978935inv | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 47,092,259 | 47,092,259 |
nssv17975975 | Remapped | Perfect | NC_000007.14:g.699 40754inv673NC_0000 07.14:g.47033206in v673 | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 69,940,754 | 69,940,754 |
nssv17975936 | Remapped | Perfect | NC_000007.14:g.470 92259invNC_000007. 14:g.69978935inv | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 69,978,935 | 69,978,935 |
nssv17975975 | Submitted genomic | NC_000007.13:g.470 72804inv673NC_0000 07.13:g.69405740in v673 | GRCh37 (hg19) | NC_000007.13 | Chr7 | 47,072,804 | 47,072,804 | ||
nssv17975936 | Submitted genomic | NC_000007.13:g.471 31857invNC_000007. 13:g.69443921inv | GRCh37 (hg19) | NC_000007.13 | Chr7 | 47,131,857 | 47,131,857 | ||
nssv17975975 | Submitted genomic | NC_000007.13:g.470 72804inv673NC_0000 07.13:g.69405740in v673 | GRCh37 (hg19) | NC_000007.13 | Chr7 | 69,405,740 | 69,405,740 | ||
nssv17975936 | Submitted genomic | NC_000007.13:g.471 31857invNC_000007. 13:g.69443921inv | GRCh37 (hg19) | NC_000007.13 | Chr7 | 69,443,921 | 69,443,921 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv17975975 | GRCh37: NC_000007.13:g.47072804inv673NC_000007.13:g.69405740inv673 | inversion | unknown | Abnormal facial shape; Abnormal facial shape; Atypical behavior; Behavioral abnormality | Pathogenic | ClinVar | RCV000258763.1, VCV000267970.1 |
nssv17975936 | GRCh37: NC_000007.13:g.47131857invNC_000007.13:g.69443921inv | inversion | unknown | Abnormal facial shape; Abnormal facial shape; Atypical behavior; Behavioral abnormality | Pathogenic | ClinVar | RCV000258763.1, VCV000267970.1 |