nsv6314485
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex chromosomal rearrangement
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1
- Description:46;Y;inv(X)(q27q28) AND multiple conditions
- Publication(s):Manickam et al. 2021, Michelson et al. 2011, Redin et al. 2016, Styne et al. 2017
- ClinVar: RCV000258590.1
- ClinVar: VCV000267831.1
- HP: 0000053
- HP: 0000164
- HP: 0000400
- HP: 0000463
- HP: 0000490
- HP: 0000670
- HP: 0000771
- HP: 0000953
- HP: 0000956
- HP: 0001000
- HP: 0001182
- HP: 0001263
- HP: 0001513
- HP: 0001999
- HP: 0400004
- MONDO: 0001210
- MONDO: 0001571
- MONDO: 0005276
- MONDO: 0007035
- MONDO: 0011122
- MONDO: 0019289
- MeSH: D000052
- MeSH: D009765
- MedGen: C0000889
- MedGen: C0011334
- MedGen: C0018418
- MedGen: C0028754
- MedGen: C0152421
- MedGen: C0162834
- MedGen: C0262444
- MedGen: C0423224
- MedGen: C0424503
- MedGen: C0426886
- MedGen: C0557874
- MedGen: C1260926
- MedGen: C1263023
- MedGen: C1840077
- MedGen: C1848657
- Orphanet: 71529
- PubMed: 21956720
- PubMed: 27841880
- PubMed: 28359099
- PubMed: 34211152
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 81 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 81 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 135 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 136 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 276 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 282 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 81 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 81 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 134 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 135 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 276 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 282 SVs from 26 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 136,218,170 | 136,218,170 | + |
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 136,218,259 | 136,218,259 | - |
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 155,159,917 | 155,159,917 | - |
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 155,161,938 | 155,161,938 | + |
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 694,460 | 694,460 | + |
nsv6314485 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 737,632 | 737,632 | + |
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 135,300,329 | 135,300,329 | + | ||
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 135,300,418 | 135,300,418 | - | ||
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 154,388,192 | 154,388,192 | - | ||
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 154,390,213 | 154,390,213 | + | ||
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 655,195 | 655,195 | + | ||
nsv6314485 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 698,367 | 698,367 | + |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv17975409 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 694,460 | 694,460 | + |
nssv17975410 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 737,632 | 737,632 | + |
nssv17975409 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 136,218,170 | 136,218,170 | + |
nssv17975412 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 136,218,259 | 136,218,259 | - |
nssv17975410 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 155,159,917 | 155,159,917 | - |
nssv17975412 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 155,161,938 | 155,161,938 | + |
nssv17975409 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 655,195 | 655,195 | + | ||
nssv17975410 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 698,367 | 698,367 | + | ||
nssv17975409 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 135,300,329 | 135,300,329 | + | ||
nssv17975412 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 135,300,418 | 135,300,418 | - | ||
nssv17975410 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 154,388,192 | 154,388,192 | - | ||
nssv17975412 | Submitted genomic | GRCh37 (hg19) | NC_000023.10 | ChrX | 154,390,213 | 154,390,213 | + |