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dbVar

Database of genomic structural variation

nsv6620327

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:20,002

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 561 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):133,198,880-133,218,881

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620327	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	133,198,880	133,218,881
nsv6620327	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	135,012,384	135,032,385

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18287164	duplication	OSC2924	SNP array	Probe signal intensity	13
nssv18294099	duplication	OSC4310	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18287164	Remapped	Perfect	NC_000010.11:g.(?_ 133198880)_(133218 881_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,198,880	133,218,881
nssv18294099	Remapped	Perfect	NC_000010.11:g.(?_ 133198880)_(133218 881_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,198,880	133,218,881
nssv18287164	Submitted genomic		NC_000010.10:g.(?_ 135012384)_(135032 385_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	135,012,384	135,032,385
nssv18294099	Submitted genomic		NC_000010.10:g.(?_ 135012384)_(135032 385_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	135,012,384	135,032,385

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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