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dbVar

Database of genomic structural variation

nsv6620363

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:100,862

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 630 SVs from 59 studies. See in: genome view

Remapped(Score: Perfect):34,770,002-34,870,863

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620363	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	34,770,002	34,870,863
nsv6620363	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	35,058,930	35,159,791

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284172	duplication	OSC2529	SNP array	Probe signal intensity	5
nssv18302126	duplication	OSC0588	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284172	Remapped	Perfect	NC_000010.11:g.(?_ 34770002)_(3487086 3_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	34,770,002	34,870,863
nssv18302126	Remapped	Perfect	NC_000010.11:g.(?_ 34770002)_(3487086 3_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	34,770,002	34,870,863
nssv18284172	Submitted genomic		NC_000010.10:g.(?_ 35058930)_(3515979 1_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	35,058,930	35,159,791
nssv18302126	Submitted genomic		NC_000010.10:g.(?_ 35058930)_(3515979 1_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	35,058,930	35,159,791

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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