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dbVar

Database of genomic structural variation

nsv6620374

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:122,276

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 506 SVs from 72 studies. See in: genome view

Remapped(Score: Perfect):44,741,760-44,864,035

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620374	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	44,741,760	44,864,035
nsv6620374	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	45,237,208	45,359,483

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282700	duplication	OSC2142	SNP array	Probe signal intensity	5
nssv18287519	duplication	OSC2947	SNP array	Probe signal intensity	6
nssv18287869	duplication	OSC3170	SNP array	Probe signal intensity	12
nssv18296041	duplication	OSC4661	SNP array	Probe signal intensity	nssv18295724, nssv18296389

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282700	Remapped	Perfect	NC_000010.11:g.(?_ 44741760)_(4486403 5_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	44,741,760	44,864,035
nssv18287519	Remapped	Perfect	NC_000010.11:g.(?_ 44741760)_(4486403 5_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	44,741,760	44,864,035
nssv18287869	Remapped	Perfect	NC_000010.11:g.(?_ 44741760)_(4486403 5_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	44,741,760	44,864,035
nssv18296041	Remapped	Perfect	NC_000010.11:g.(?_ 44741760)_(4486403 5_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	44,741,760	44,864,035
nssv18282700	Submitted genomic		NC_000010.10:g.(?_ 45237208)_(4535948 3_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	45,237,208	45,359,483
nssv18287519	Submitted genomic		NC_000010.10:g.(?_ 45237208)_(4535948 3_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	45,237,208	45,359,483
nssv18287869	Submitted genomic		NC_000010.10:g.(?_ 45237208)_(4535948 3_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	45,237,208	45,359,483
nssv18296041	Submitted genomic		NC_000010.10:g.(?_ 45237208)_(4535948 3_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	45,237,208	45,359,483

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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