Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6620389

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:41,476

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2215 SVs from 100 studies. See in: genome view

Remapped(Score: Perfect):46,291,235-46,332,710

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620389	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	46,291,235	46,332,710
nsv6620389	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	47,662,471	47,703,946

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282599	duplication	OSC2063	SNP array	Probe signal intensity	9
nssv18287991	duplication	OSC3248	SNP array	Probe signal intensity	9
nssv18317306	duplication	OSC0877	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282599	Remapped	Perfect	NC_000010.11:g.(?_ 46291235)_(4633271 0_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,291,235	46,332,710
nssv18287991	Remapped	Perfect	NC_000010.11:g.(?_ 46291235)_(4633271 0_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,291,235	46,332,710
nssv18317306	Remapped	Perfect	NC_000010.11:g.(?_ 46291235)_(4633271 0_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	46,291,235	46,332,710
nssv18282599	Submitted genomic		NC_000010.10:g.(?_ 47662471)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,662,471	47,703,946
nssv18287991	Submitted genomic		NC_000010.10:g.(?_ 47662471)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,662,471	47,703,946
nssv18317306	Submitted genomic		NC_000010.10:g.(?_ 47662471)_(4770394 6_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	47,662,471	47,703,946

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI