nsv6621113
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:235,736
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2732 SVs from 109 studies. See in: genome view
Overlapping variant regions from other studies: 2738 SVs from 109 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6621113 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 55,403,551 | 55,639,286 |
| nsv6621113 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 55,171,027 | 55,406,762 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18282235 | deletion | OSC2261 | SNP array | Probe signal intensity | nssv18281907, nssv18282234, nssv18282851 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18282235 | Remapped | Perfect | NC_000011.10:g.(?_ 55403551)_(5563928 6_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 55,403,551 | 55,639,286 |
| nssv18282235 | Submitted genomic | NC_000011.9:g.(?_5 5171027)_(55406762 _?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 55,171,027 | 55,406,762 |