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dbVar

Database of genomic structural variation

nsv6622706

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:37,404

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 206 SVs from 42 studies. See in: genome view

Remapped(Score: Perfect):26,635,654-26,673,057

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6622706	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	26,635,654	26,673,057
nsv6622706	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000014.8	Chr14	27,104,860	27,142,263

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18288729	deletion	OSC3151	SNP array	Probe signal intensity	nssv18287845, nssv18287846, nssv18288728
nssv18292884	deletion	OSC4100	SNP array	Probe signal intensity	8
nssv18301155	duplication	OSC5481	SNP array	Probe signal intensity	nssv18300273, nssv18300864, nssv18301156

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18288729	Remapped	Perfect	NC_000014.9:g.(?_2 6635654)_(26673057 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	26,635,654	26,673,057
nssv18292884	Remapped	Perfect	NC_000014.9:g.(?_2 6635654)_(26673057 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	26,635,654	26,673,057
nssv18301155	Remapped	Perfect	NC_000014.9:g.(?_2 6635654)_(26673057 _?)dup	GRCh38.p12	First Pass	NC_000014.9	Chr14	26,635,654	26,673,057
nssv18288729	Submitted genomic		NC_000014.8:g.(?_2 7104860)_(27142263 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	27,104,860	27,142,263
nssv18292884	Submitted genomic		NC_000014.8:g.(?_2 7104860)_(27142263 _?)del	GRCh37 (hg19)		NC_000014.8	Chr14	27,104,860	27,142,263
nssv18301155	Submitted genomic		NC_000014.8:g.(?_2 7104860)_(27142263 _?)dup	GRCh37 (hg19)		NC_000014.8	Chr14	27,104,860	27,142,263

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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