nsv6622816
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:21,977
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 416 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 416 SVs from 56 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6622816 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 101,836,452 | 101,858,428 |
| nsv6622816 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 102,376,655 | 102,398,631 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18289200 | deletion | OSC3460 | SNP array | Probe signal intensity | nssv18289443, nssv18289769, nssv18289444 |
| nssv18319648 | deletion | OSC0910 | SNP array | Probe signal intensity | 6 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18289200 | Remapped | Perfect | NC_000015.10:g.(?_ 101836452)_(101858 428_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 101,836,452 | 101,858,428 |
| nssv18319648 | Remapped | Perfect | NC_000015.10:g.(?_ 101836452)_(101858 428_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 101,836,452 | 101,858,428 |
| nssv18289200 | Submitted genomic | NC_000015.9:g.(?_1 02376655)_(1023986 31_?)del | GRCh37 (hg19) | NC_000015.9 | Chr15 | 102,376,655 | 102,398,631 | ||
| nssv18319648 | Submitted genomic | NC_000015.9:g.(?_1 02376655)_(1023986 31_?)del | GRCh37 (hg19) | NC_000015.9 | Chr15 | 102,376,655 | 102,398,631 |