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dbVar

Database of genomic structural variation

nsv6624132

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:8
Validation:Not tested
Clinical Assertions: No
Region Size:10,000

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 212 SVs from 26 studies. See in: genome view

Remapped(Score: Perfect):13,731,521-13,741,520

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6624132	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nsv6624132	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000018.9	Chr18	13,731,520	13,741,519

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18287913	duplication	OSC3194	SNP array	Probe signal intensity	11
nssv18289195	duplication	OSC3455	SNP array	Probe signal intensity	nssv18289194, nssv18289762, nssv18289763
nssv18300714	duplication	OSC0582	SNP array	Probe signal intensity	14
nssv18312148	duplication	OSC0775	SNP array	Probe signal intensity	6
nssv18315140	duplication	OSC0852	SNP array	Probe signal intensity	14
nssv18319510	duplication	OSC0901	SNP array	Probe signal intensity	14
nssv18322748	duplication	OSC1400	SNP array	Probe signal intensity	5
nssv18322817	duplication	OSC1448	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18287913	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18289195	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18300714	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18312148	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18315140	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18319510	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18322748	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18322817	Remapped	Perfect	NC_000018.10:g.(?_ 13731521)_(1374152 0_?)dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	13,731,521	13,741,520
nssv18287913	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18289195	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18300714	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18312148	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18315140	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18319510	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18322748	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519
nssv18322817	Submitted genomic		NC_000018.9:g.(?_1 3731520)_(13741519 _?)dup	GRCh37 (hg19)		NC_000018.9	Chr18	13,731,520	13,741,519

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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