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dbVar

Database of genomic structural variation

nsv6624227

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:87,428

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 429 SVs from 61 studies. See in: genome view

Remapped(Score: Perfect):35,353,922-35,441,349

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6624227	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nsv6624227	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	33,680,941	33,768,368

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18293524	deletion	OSC4146	SNP array	Probe signal intensity	5
nssv18295906	deletion	OSC4560	SNP array	Probe signal intensity	5
nssv18296843	deletion	OSC4797	SNP array	Probe signal intensity	nssv18296842
nssv18320346	deletion	OSC0991	SNP array	Probe signal intensity	7
nssv18326269	deletion	OSC2014	SNP array	Probe signal intensity	nssv18326013, nssv18326014, nssv18326015

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18293524	Remapped	Perfect	NC_000017.11:g.(?_ 35353922)_(3544134 9_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nssv18295906	Remapped	Perfect	NC_000017.11:g.(?_ 35353922)_(3544134 9_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nssv18296843	Remapped	Perfect	NC_000017.11:g.(?_ 35353922)_(3544134 9_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nssv18320346	Remapped	Perfect	NC_000017.11:g.(?_ 35353922)_(3544134 9_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nssv18326269	Remapped	Perfect	NC_000017.11:g.(?_ 35353922)_(3544134 9_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	35,353,922	35,441,349
nssv18293524	Submitted genomic		NC_000017.10:g.(?_ 33680941)_(3376836 8_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	33,680,941	33,768,368
nssv18295906	Submitted genomic		NC_000017.10:g.(?_ 33680941)_(3376836 8_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	33,680,941	33,768,368
nssv18296843	Submitted genomic		NC_000017.10:g.(?_ 33680941)_(3376836 8_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	33,680,941	33,768,368
nssv18320346	Submitted genomic		NC_000017.10:g.(?_ 33680941)_(3376836 8_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	33,680,941	33,768,368
nssv18326269	Submitted genomic		NC_000017.10:g.(?_ 33680941)_(3376836 8_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	33,680,941	33,768,368

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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