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dbVar

Database of genomic structural variation

nsv6624413

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:197,401

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 778 SVs from 49 studies. See in: genome view

Remapped(Score: Perfect):70,005,198-70,202,598

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6624413	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	70,005,198	70,202,598
nsv6624413	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000018.9	Chr18	67,672,434	67,869,834

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18288629	deletion	OSC3297	SNP array	Probe signal intensity	7
nssv18292928	deletion	OSC4131	SNP array	Probe signal intensity	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18288629	Remapped	Perfect	NC_000018.10:g.(?_ 70005198)_(7020259 8_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	70,005,198	70,202,598
nssv18292928	Remapped	Perfect	NC_000018.10:g.(?_ 70005198)_(7020259 8_?)del	GRCh38.p12	First Pass	NC_000018.10	Chr18	70,005,198	70,202,598
nssv18288629	Submitted genomic		NC_000018.9:g.(?_6 7672434)_(67869834 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	67,672,434	67,869,834
nssv18292928	Submitted genomic		NC_000018.9:g.(?_6 7672434)_(67869834 _?)del	GRCh37 (hg19)		NC_000018.9	Chr18	67,672,434	67,869,834

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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