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dbVar

Database of genomic structural variation

nsv6625203

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:48,133

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1539 SVs from 99 studies. See in: genome view

Remapped(Score: Perfect):43,150,057-43,198,189

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625203	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	43,150,057	43,198,189
nsv6625203	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	43,654,209	43,702,341

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282393	deletion	OSC2136	SNP array	Probe signal intensity	6
nssv18316719	deletion	OSC0872	SNP array	Probe signal intensity	nssv18316724, nssv18316980
nssv18323062	deletion	OSC1431	SNP array	Probe signal intensity	7
nssv18326194	deletion	OSC1985	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282393	Remapped	Perfect	NC_000019.10:g.(?_ 43150057)_(4319818 9_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	43,150,057	43,198,189
nssv18316719	Remapped	Perfect	NC_000019.10:g.(?_ 43150057)_(4319818 9_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	43,150,057	43,198,189
nssv18323062	Remapped	Perfect	NC_000019.10:g.(?_ 43150057)_(4319818 9_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	43,150,057	43,198,189
nssv18326194	Remapped	Perfect	NC_000019.10:g.(?_ 43150057)_(4319818 9_?)del	GRCh38.p12	First Pass	NC_000019.10	Chr19	43,150,057	43,198,189
nssv18282393	Submitted genomic		NC_000019.9:g.(?_4 3654209)_(43702341 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	43,654,209	43,702,341
nssv18316719	Submitted genomic		NC_000019.9:g.(?_4 3654209)_(43702341 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	43,654,209	43,702,341
nssv18323062	Submitted genomic		NC_000019.9:g.(?_4 3654209)_(43702341 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	43,654,209	43,702,341
nssv18326194	Submitted genomic		NC_000019.9:g.(?_4 3654209)_(43702341 _?)del	GRCh37 (hg19)		NC_000019.9	Chr19	43,654,209	43,702,341

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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