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dbVar

Database of genomic structural variation

nsv6625904

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:12,905

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 548 SVs from 81 studies. See in: genome view

Remapped(Score: Perfect):16,040,844-16,053,748

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625904	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	16,040,844	16,053,748
nsv6625904	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	16,367,339	16,380,243

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18296435	duplication	OSC4672	SNP array	Probe signal intensity	nssv18295737, nssv18295738, nssv18296056
nssv18320913	duplication	OSC1014	SNP array	Probe signal intensity	nssv18320376, nssv18320629, nssv18320914

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18296435	Remapped	Perfect	NC_000001.11:g.(?_ 16040844)_(1605374 8_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,040,844	16,053,748
nssv18320913	Remapped	Perfect	NC_000001.11:g.(?_ 16040844)_(1605374 8_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,040,844	16,053,748
nssv18296435	Submitted genomic		NC_000001.10:g.(?_ 16367339)_(1638024 3_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	16,367,339	16,380,243
nssv18320913	Submitted genomic		NC_000001.10:g.(?_ 16367339)_(1638024 3_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	16,367,339	16,380,243

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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