nsv6625960
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:33,364
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 395 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 399 SVs from 74 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625960 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 212,831,670 | 212,865,033 |
| nsv6625960 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 213,005,012 | 213,038,375 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18284246 | deletion | OSC2584 | SNP array | Probe signal intensity | nssv18284245, nssv18284247, nssv18284852 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18284246 | Remapped | Perfect | NC_000001.11:g.(?_ 212831670)_(212865 033_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 212,831,670 | 212,865,033 |
| nssv18284246 | Submitted genomic | NC_000001.10:g.(?_ 213005012)_(213038 375_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 213,005,012 | 213,038,375 |