nsv6628329
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:117,198
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 476 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 476 SVs from 53 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6628329 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 61,163,084 | 61,280,281 |
| nsv6628329 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 61,390,219 | 61,507,416 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18284122 | duplication | OSC2495 | SNP array | Probe signal intensity | nssv18284121, nssv18284724, nssv18285058 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18284122 | Remapped | Perfect | NC_000002.12:g.(?_ 61163084)_(6128028 1_?)dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 61,163,084 | 61,280,281 |
| nssv18284122 | Submitted genomic | NC_000002.11:g.(?_ 61390219)_(6150741 6_?)dup | GRCh37 (hg19) | NC_000002.11 | Chr2 | 61,390,219 | 61,507,416 |