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dbVar

Database of genomic structural variation

nsv6629309

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:333,713

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2612 SVs from 106 studies. See in: genome view

Remapped(Score: Perfect):75,404,143-75,737,855

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6629309	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	75,404,143	75,737,855
nsv6629309	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	75,453,294	75,787,006

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18293308	deletion	OSC4242	SNP array	Probe signal intensity	6
nssv18306435	deletion	OSC0684	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18293308	Remapped	Perfect	NC_000003.12:g.(?_ 75404143)_(7573785 5_?)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	75,404,143	75,737,855
nssv18306435	Remapped	Perfect	NC_000003.12:g.(?_ 75404143)_(7573785 5_?)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	75,404,143	75,737,855
nssv18293308	Submitted genomic		NC_000003.11:g.(?_ 75453294)_(7578700 6_?)del	GRCh37 (hg19)		NC_000003.11	Chr3	75,453,294	75,787,006
nssv18306435	Submitted genomic		NC_000003.11:g.(?_ 75453294)_(7578700 6_?)del	GRCh37 (hg19)		NC_000003.11	Chr3	75,453,294	75,787,006

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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