nsv6629313
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,057,620
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5154 SVs from 115 studies. See in: genome view
Overlapping variant regions from other studies: 5160 SVs from 115 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6629313 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 40,338 | 1,097,957 |
| nsv6629313 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 82,010 | 1,139,641 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18283279 | deletion | OSC2354 | SNP array | Probe signal intensity | nssv18283278, nssv18283280, nssv18283281 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18283279 | Remapped | Good | NC_000003.12:g.(?_ 40338)_(1097957_?) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 40,338 | 1,097,957 |
| nssv18283279 | Submitted genomic | NC_000003.11:g.(?_ 82010)_(1139641_?) del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 82,010 | 1,139,641 |