nsv6629570

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:43
Validation:Not tested
Clinical Assertions: No
Region Size:49,193

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 638 SVs from 68 studies. See in: genome view

Remapped(Score: Perfect):161,032,577-161,081,769

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6629570	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nsv6629570	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	161,953,729	162,002,921

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282304	duplication	OSC0214	SNP array	Probe signal intensity	5
nssv18282435	duplication	OSC2166	SNP array	Probe signal intensity	9
nssv18283199	duplication	OSC2300	SNP array	Probe signal intensity	10
nssv18284033	duplication	OSC2434	SNP array	Probe signal intensity	nssv18283106, nssv18283723
nssv18285412	duplication	OSC2743	SNP array	Probe signal intensity	5
nssv18285834	duplication	OSC2902	SNP array	Probe signal intensity	7
nssv18285999	duplication	OSC2737	SNP array	Probe signal intensity	6
nssv18286626	duplication	OSC2954	SNP array	Probe signal intensity	nssv18287531, nssv18287532
nssv18287073	duplication	OSC3105	SNP array	Probe signal intensity	5
nssv18288083	duplication	OSC3307	SNP array	Probe signal intensity	10
nssv18289558	duplication	OSC3551	SNP array	Probe signal intensity	nssv18289896, nssv18290245
nssv18290443	duplication	OSC3692	SNP array	Probe signal intensity	5
nssv18291105	duplication	OSC3746	SNP array	Probe signal intensity	9
nssv18291356	duplication	OSC3712	SNP array	Probe signal intensity	6
nssv18291510	duplication	OSC3792	SNP array	Probe signal intensity	8
nssv18291863	duplication	OSC3891	SNP array	Probe signal intensity	nssv18291864, nssv18291865, nssv18291866
nssv18292521	duplication	OSC3877	SNP array	Probe signal intensity	nssv18291624, nssv18292208
nssv18292550	duplication	OSC3895	SNP array	Probe signal intensity	10
nssv18293365	duplication	OSC4036	SNP array	Probe signal intensity	nssv18292785, nssv18293686, nssv18293687
nssv18294291	duplication	OSC4276	SNP array	Probe signal intensity	nssv18294627
nssv18294469	duplication	OSC4418	SNP array	Probe signal intensity	6
nssv18294655	duplication	OSC0446	SNP array	Probe signal intensity	nssv18294319
nssv18294674	duplication	OSC4313	SNP array	Probe signal intensity	10
nssv18295492	duplication	OSC4481	SNP array	Probe signal intensity	6
nssv18295614	duplication	OSC4583	SNP array	Probe signal intensity	7
nssv18295846	duplication	OSC4516	SNP array	Probe signal intensity	6
nssv18296294	duplication	OSC4587	SNP array	Probe signal intensity	9
nssv18307821	duplication	OSC0070	SNP array	Probe signal intensity	6
nssv18308094	duplication	OSC0726	SNP array	Probe signal intensity	7
nssv18317421	duplication	OSC0884	SNP array	Probe signal intensity	6
nssv18319887	duplication	OSC0928	SNP array	Probe signal intensity	7
nssv18319998	duplication	OSC1008	SNP array	Probe signal intensity	14
nssv18321398	duplication	OSC1101	SNP array	Probe signal intensity	6
nssv18321473	duplication	OSC1162	SNP array	Probe signal intensity	10
nssv18322177	duplication	OSC1272	SNP array	Probe signal intensity	5
nssv18322743	duplication	OSC1397	SNP array	Probe signal intensity	10
nssv18322879	duplication	OSC1494	SNP array	Probe signal intensity	7
nssv18324606	duplication	OSC1668	SNP array	Probe signal intensity	10
nssv18324804	duplication	OSC1822	SNP array	Probe signal intensity	nssv18324801, nssv18324802, nssv18324803
nssv18324954	duplication	OSC1914	SNP array	Probe signal intensity	6
nssv18325151	duplication	OSC1805	SNP array	Probe signal intensity	8
nssv18325208	duplication	OSC1840	SNP array	Probe signal intensity	6
nssv18325619	duplication	OSC1925	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282304	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18282435	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18283199	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18284033	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18285412	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18285834	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18285999	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18286626	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18287073	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18288083	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18289558	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18290443	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18291105	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18291356	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18291510	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18291863	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18292521	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18292550	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18293365	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18294291	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18294469	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18294655	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18294674	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18295492	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18295614	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18295846	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18296294	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18307821	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18308094	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18317421	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18319887	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18319998	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18321398	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18321473	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18322177	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18322743	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18322879	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18324606	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18324804	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18324954	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18325151	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18325208	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18325619	Remapped	Perfect	NC_000004.12:g.(?_ 161032577)_(161081 769_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	161,032,577	161,081,769
nssv18282304	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18282435	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18283199	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18284033	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18285412	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18285834	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18285999	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18286626	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18287073	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18288083	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18289558	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18290443	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18291105	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18291356	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18291510	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18291863	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18292521	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18292550	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18293365	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18294291	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18294469	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18294655	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18294674	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18295492	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18295614	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18295846	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18296294	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18307821	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18308094	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18317421	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18319887	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18319998	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18321398	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18321473	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18322177	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18322743	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18322879	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18324606	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18324804	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18324954	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18325151	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18325208	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921
nssv18325619	Submitted genomic		NC_000004.11:g.(?_ 161953729)_(162002 921_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	161,953,729	162,002,921

dbVar

Database of genomic structural variation

nsv6629570

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Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant