nsv6629842
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:28,434
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 206 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 206 SVs from 31 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6629842 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 112,237,898 | 112,266,331 |
| nsv6629842 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 111,573,595 | 111,602,028 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18289654 | duplication | OSC3375 | SNP array | Probe signal intensity | nssv18289082, nssv18289324, nssv18289655 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18289654 | Remapped | Perfect | NC_000005.10:g.(?_ 112237898)_(112266 331_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 112,237,898 | 112,266,331 |
| nssv18289654 | Submitted genomic | NC_000005.9:g.(?_1 11573595)_(1116020 28_?)dup | GRCh37 (hg19) | NC_000005.9 | Chr5 | 111,573,595 | 111,602,028 |