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dbVar

Database of genomic structural variation

nsv6629922

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:104,071

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 513 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):70,306,003-70,410,073

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6629922	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	70,306,003	70,410,073
nsv6629922	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	71,171,720	71,275,790

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284346	deletion	OSC2652	SNP array	Probe signal intensity	7
nssv18322833	deletion	OSC0149	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284346	Remapped	Perfect	NC_000004.12:g.(?_ 70306003)_(7041007 3_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	70,306,003	70,410,073
nssv18322833	Remapped	Perfect	NC_000004.12:g.(?_ 70306003)_(7041007 3_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	70,306,003	70,410,073
nssv18284346	Submitted genomic		NC_000004.11:g.(?_ 71171720)_(7127579 0_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	71,171,720	71,275,790
nssv18322833	Submitted genomic		NC_000004.11:g.(?_ 71171720)_(7127579 0_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	71,171,720	71,275,790

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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