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dbVar

Database of genomic structural variation

nsv6630771

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:247,693

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1898 SVs from 96 studies. See in: genome view

Remapped(Score: Perfect):167,947,879-168,195,571

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630771	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	167,947,879	168,195,571
nsv6630771	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	168,348,559	168,596,251

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18286508	duplication	OSC0297	SNP array	Probe signal intensity	5
nssv18291175	duplication	OSC3584	SNP array	Probe signal intensity	8
nssv18315733	duplication	OSC0850	SNP array	Probe signal intensity	8
nssv18323036	duplication	OSC1414	SNP array	Probe signal intensity	nssv18322382, nssv18322769

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18286508	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168195 571_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,195,571
nssv18291175	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168195 571_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,195,571
nssv18315733	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168195 571_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,195,571
nssv18323036	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168195 571_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,195,571
nssv18286508	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168596 251_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,596,251
nssv18291175	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168596 251_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,596,251
nssv18315733	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168596 251_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,596,251
nssv18323036	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168596 251_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,596,251

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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