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dbVar

Database of genomic structural variation

nsv6630879

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:42,707

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 329 SVs from 49 studies. See in: genome view

Remapped(Score: Perfect):76,790,772-76,833,478

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630879	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	76,790,772	76,833,478
nsv6630879	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	76,086,597	76,129,303

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284174	duplication	OSC2530	SNP array	Probe signal intensity	nssv18284173, nssv18284779, nssv18284780
nssv18295568	duplication	OSC4541	SNP array	Probe signal intensity	6
nssv18324971	duplication	OSC1923	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284174	Remapped	Perfect	NC_000005.10:g.(?_ 76790772)_(7683347 8_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	76,790,772	76,833,478
nssv18295568	Remapped	Perfect	NC_000005.10:g.(?_ 76790772)_(7683347 8_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	76,790,772	76,833,478
nssv18324971	Remapped	Perfect	NC_000005.10:g.(?_ 76790772)_(7683347 8_?)dup	GRCh38.p12	First Pass	NC_000005.10	Chr5	76,790,772	76,833,478
nssv18284174	Submitted genomic		NC_000005.9:g.(?_7 6086597)_(76129303 _?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	76,086,597	76,129,303
nssv18295568	Submitted genomic		NC_000005.9:g.(?_7 6086597)_(76129303 _?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	76,086,597	76,129,303
nssv18324971	Submitted genomic		NC_000005.9:g.(?_7 6086597)_(76129303 _?)dup	GRCh37 (hg19)		NC_000005.9	Chr5	76,086,597	76,129,303

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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