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dbVar

Database of genomic structural variation

nsv6630971

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:91,025

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1318 SVs from 103 studies. See in: genome view

Remapped(Score: Perfect):31,392,478-31,483,502

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630971	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	31,392,478	31,483,502
nsv6630971	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	31,360,255	31,451,279

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18299460	deletion	OSC5386	SNP array	Probe signal intensity	nssv18299458, nssv18299459, nssv18300730
nssv18300028	deletion	OSC5328	SNP array	Probe signal intensity	nssv18299153
nssv18300729	deletion	OSC5385	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18299460	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148350 2_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,483,502
nssv18300028	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148350 2_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,483,502
nssv18300729	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3148350 2_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,483,502
nssv18299460	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145127 9_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,451,279
nssv18300028	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145127 9_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,451,279
nssv18300729	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3145127 9_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,451,279

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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