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dbVar

Database of genomic structural variation

nsv6631026

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:23,647

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1028 SVs from 92 studies. See in: genome view

Remapped(Score: Perfect):29,864,555-29,888,201

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6631026	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nsv6631026	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	29,832,332	29,855,978

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18286899	duplication	OSC3000	SNP array	Probe signal intensity	8
nssv18294932	duplication	OSC4261	SNP array	Probe signal intensity	6
nssv18298353	duplication	OSC4989	SNP array	Probe signal intensity	7
nssv18299307	duplication	OSC5255	SNP array	Probe signal intensity	6
nssv18299494	duplication	OSC5151	SNP array	Probe signal intensity	5
nssv18301133	duplication	OSC5467	SNP array	Probe signal intensity	5
nssv18318548	duplication	OSC0900	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18286899	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18294932	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18298353	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18299307	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18299494	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18301133	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18318548	Remapped	Perfect	NC_000006.12:g.(?_ 29864555)_(2988820 1_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	29,864,555	29,888,201
nssv18286899	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18294932	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18298353	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18299307	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18299494	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18301133	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978
nssv18318548	Submitted genomic		NC_000006.11:g.(?_ 29832332)_(2985597 8_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	29,832,332	29,855,978

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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