nsv6631799
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:147,561
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1124 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 1124 SVs from 82 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6631799 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 101,325,082 | 101,472,642 |
| nsv6631799 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 100,968,363 | 101,115,923 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18282747 | duplication | OSC2175 | SNP array | Probe signal intensity | nssv18282746 |
| nssv18296019 | duplication | OSC4642 | SNP array | Probe signal intensity | nssv18295471, nssv18295472, nssv18296020 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18282747 | Remapped | Perfect | NC_000007.14:g.(?_ 101325082)_(101472 642_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,325,082 | 101,472,642 |
| nssv18296019 | Remapped | Perfect | NC_000007.14:g.(?_ 101325082)_(101472 642_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 101,325,082 | 101,472,642 |
| nssv18282747 | Submitted genomic | NC_000007.13:g.(?_ 100968363)_(101115 923_?)dup | GRCh37 (hg19) | NC_000007.13 | Chr7 | 100,968,363 | 101,115,923 | ||
| nssv18296019 | Submitted genomic | NC_000007.13:g.(?_ 100968363)_(101115 923_?)dup | GRCh37 (hg19) | NC_000007.13 | Chr7 | 100,968,363 | 101,115,923 |