nsv6632282
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:61,295
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 509 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 262 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 509 SVs from 78 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6632282 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 9,033,870 | 9,088,611 |
| nsv6632282 | Remapped | Pass | GRCh38.p12 | PATCHES | Second Pass | NW_019805493.1 | Chr7|NW_01 9805493.1 | 7,513 | 68,807 |
| nsv6632282 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 9,073,500 | 9,128,241 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18289922 | deletion | OSC3566 | SNP array | Probe signal intensity | nssv18290266, nssv18290267, nssv18289923 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18289922 | Remapped | Pass | NW_019805493.1:g.( ?_7513)_(68807_?)d el | GRCh38.p12 | Second Pass | NW_019805493.1 | Chr7|NW_01 9805493.1 | 7,513 | 68,807 |
| nssv18289922 | Remapped | Perfect | NC_000007.14:g.(?_ 9033870)_(9088611_ ?)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 9,033,870 | 9,088,611 |
| nssv18289922 | Submitted genomic | NC_000007.13:g.(?_ 9073500)_(9128241_ ?)del | GRCh37 (hg19) | NC_000007.13 | Chr7 | 9,073,500 | 9,128,241 |